group

C4-11

C4-2

C8-1

C8-2

C12-1

C12-1

C20-1

C20-2

QC Assessment

Q20

99.38

99.32

98.32

99.43

99.55

99.58

98.95

98.52

Q30

89.51

89.11

87.59

88.27

91

90.98

88.45

86.83

GC

51.5

51.5

48

44

47.5

47.5

41.5

49.5

Alignment

Total input reads

8,143,779

7,666,869

5,168,767

1,243,689

6,537,159

3,997,637

3,926,078

3,416,860

Average input read length

152

152

152

152

152

152

152

152

Unique Reads

Uniquely mapped reads

7,355,633

6,962,959

460,894

587,890

3,901,494

3,282,054

3,259,942

987,401

% of uniquely mapped reads

90.32%

90.82%

8.92%

47.27%

59.68%

82.10%

83.03%

28.90%

Chimeric Reads

Number of chimeric reads

66,757

76,750

2608

5456

49,003

42,488

27,970

8691

% of chimeric reads

0.82%

1.00%

0.05%

0.44%

0.75%

1.06%

0.71%

0.25%